Package index

All functions

bam_count()

Count BAM records with Bioconductor-compatible filtering

bam_read()

Fast BAM reading with Bioconductor-compatible arguments

decode_compact_qual()

Decode compact BamScale quality output

decode_compact_seq()

Decode compact BamScale sequence output

decode_seqqual_compact()

Decode compact seq and qual columns in BamScale output