Retrieve stored cell fraction estimates

Retrieve stored cell fraction estimates

Usage

get_cell_fractions(x)

Arguments

x

A VISTA object.

Value

A data.frame of cell fraction estimates with samples in rows.

Examples

v <- example_vista()
if (requireNamespace('xCell2', quietly = TRUE)) {
  vx <- try(run_cell_deconvolution(v, method = 'xCell2'), silent = TRUE)
  if (!inherits(vx, 'try-error')) head(get_cell_fractions(vx))
}
#> Starting xCell2 Analysis...